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1

Metabolic Labeling of Newly Transcribed RNA for High Resolution Gene Expression Profiling of RNA Synthesis, Processing and Decay in Cell Culture

Rädle, Bernd, Rutkowski, Andrzej J., Ruzsics, Zsolt, Friedel, Caroline C., Koszinowski, Ulrich H., Dölken, Lars

Journal:

Journal of Visualized Experiments

Year:

2013

Language:

english

File:

PDF, 755 KB

english, 2013

2

Prevalence and frequency of circulating t(14;18)-MBR translocation carrying cells in healthy individuals

Frank Schüler, Lars Dölken, Carsten Hirt, Thomas Kiefer, Tobias Berg, Gerhard Fusch, K. Weitmann, W. Hoffmann, Christoph Fusch, Siegfried Janz, Charles S. Rabkin, Gottfried Dölken

Journal:

International Journal of Cancer

Year:

2009

Language:

english

File:

PDF, 130 KB

english, 2009

3

Cytomegalovirus microRNAs

Lars Dölken, Sébastien Pfeffer, Ulrich H. Koszinowski

Journal:

Year:

2009

Language:

english

File:

PDF, 284 KB

english, 2009

4

Synthesis and decay of varicella zoster virus transcripts

Yevgeniy Azarkh, Lars Dölken, Maria Nagel, Don Gilden, Randall J. Cohrs

Journal:

Journal of NeuroVirology

Year:

2011

Language:

english

File:

PDF, 255 KB

english, 2011

5

Metabolic tagging and purification of nascent RNA: implications for transcriptomics

Friedel, Caroline C., Dölken, Lars

Journal:

Molecular BioSystems

Year:

2009

Language:

english

File:

PDF, 990 KB

english, 2009

6

All for One and One for All: Herpesviral MicroRNAs Close in on Their Prey

Lars Dölken, Stipan Jonjic

Journal:

Cell Host & Microbe

Year:

2009

Language:

english

File:

PDF, 207 KB

english, 2009

7

Systematic Analysis of Viral and Cellular MicroRNA Targets in Cells Latently Infected with Human γ-Herpesviruses by RISC Immunoprecipitation Assay

Lars Dölken, Georg Malterer, Florian Erhard, Sheila Kothe, Caroline C. Friedel, Guillaume Suffert, Lisa Marcinowski, Natalie Motsch, Stephanie Barth, Michaela Beitzinger, Diana Lieber, Susanne M. Bail

Journal:

Cell Host & Microbe

Year:

2010

Language:

english

File:

PDF, 1.11 MB

english, 2010

8

CDK8 Kinase Phosphorylates Transcription Factor STAT1 to Selectively Regulate the Interferon Response

Bancerek, Joanna, Poss, Zachary C., Steinparzer, Iris, Sedlyarov, Vitaly, Pfaffenwimmer, Thaddäus, Mikulic, Ivana, Dölken, Lars, Strobl, Birgit, Müller, Mathias, Taatjes, Dylan J., Kovarik, Pavel

Journal:

Year:

2013

Language:

english

File:

PDF, 1.75 MB

english, 2013

9

Natural Killer Cells Are Required for Extramedullary Hematopoiesis following Murine Cytomegalovirus Infection

Jordan, Stefan, Ruzsics, Zsolt, Mitrović, Maja, Baranek, Thomas, Arapović, Jurica, Krmpotić, Astrid, Vivier, Eric, Dalod, Marc, Jonjić, Stipan, Dölken, Lars, Koszinowski, Ulrich H.

Journal:

Cell Host & Microbe

Year:

2013

Language:

english

File:

PDF, 1.10 MB

english, 2013

10

PARma: identification of microRNA target sites in AGO-PAR-CLIP data

Florian Erhard,Lars Dölken,Lukasz Jaskiewicz,Ralf Zimmer

Journal:

Year:

2013

Language:

english

File:

PDF, 1.04 MB

english, 2013

11

Widespread disruption of host transcription termination in HSV-1 infection

Rutkowski, Andrzej J., Erhard, Florian, L’Hernault, Anne, Bonfert, Thomas, Schilhabel, Markus, Crump, Colin, Rosenstiel, Philip, Efstathiou, Stacey, Zimmer, Ralf, Friedel, Caroline C., Dölken, Lars

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 1.26 MB

english, 2015

12

Reversible Silencing of Cytomegalovirus Genomes by Type I Interferon Governs Virus Latency

Dağ, Franziska, Dölken, Lars, Holzki, Julia, Drabig, Anja, Weingärtner, Adrien, Schwerk, Johannes, Lienenklaus, Stefan, Conte, Ianina, Geffers, Robert, Davenport, Colin, Rand, Ulfert, Köster, Mario, W

Journal:

Year:

2014

Language:

english

File:

PDF, 3.13 MB

english, 2014

13

Inactivation of Intergenic Enhancers by EBNA3A Initiates and Maintains Polycomb Signatures across a Chromatin Domain Encoding CXCL10 and CXCL9

Harth-Hertle, Marie L., Scholz, Barbara A., Erhard, Florian, Glaser, Laura V., Dölken, Lars, Zimmer, Ralf, Kempkes, Bettina, Lieberman, Paul M.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.59 MB

english, 2013

14

Cytomegalovirus microRNAs Facilitate Persistent Virus Infection in Salivary Glands

Dölken, Lars, Krmpotic, Astrid, Kothe, Sheila, Tuddenham, Lee, Tanguy, Mélanie, Marcinowski, Lisa, Ruzsics, Zsolt, Elefant, Naama, Altuvia, Yael, Margalit, Hanah, Koszinowski, Ulrich H., Jonjic, Stipa

Journal:

Year:

2010

Language:

english

File:

PDF, 1013 KB

english, 2010

15

Shedding Light on the Elusive Role of Endothelial Cells in Cytomegalovirus Dissemination

Sacher, Torsten, Andrassy, Joachim, Kalnins, Aivars, Dölken, Lars, Jordan, Stefan, Podlech, Jürgen, Ruzsics, Zsolt, Jauch, Karl-Walter, Reddehase, Matthias J., Koszinowski, Ulrich H., Nelson, Jay A.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.28 MB

english, 2011

16

RC3H1 post-transcriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-κB pathway

Murakawa, Yasuhiro, Hinz, Michael, Mothes, Janina, Schuetz, Anja, Uhl, Michael, Wyler, Emanuel, Yasuda, Tomoharu, Mastrobuoni, Guido, Friedel, Caroline C., Dölken, Lars, Kempa, Stefan, Schmidt-Suppria

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 3.27 MB

english, 2015

17

Small RNAs growing tall: miRNAs as drug targets in herpesvirus infections

L’Hernault, Anne, Dölken, Lars

Journal:

Current Opinion in Virology

Year:

2015

Language:

english

File:

PDF, 426 KB

english, 2015

18

Lymph Node Macrophages Restrict Murine Cytomegalovirus Dissemination

Farrell, Helen E., Davis-Poynter, Nick, Bruce, Kimberley, Lawler, Clara, Dolken, Lars, Mach, Michael, Stevenson, Philip G., Frueh, K.

Journal:

Journal of Virology

Year:

2015

Language:

english

File:

PDF, 4.87 MB

english, 2015

19

Small noncoding RNA: novel targets for antiviral therapy

Dölken, Lars, Haas, Jürgen

Journal:

Future Microbiology

Year:

2008

Language:

english

File:

PDF, 441 KB

english, 2008

20

4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response

Burger, Kaspar, Mühl, Bastian, Kellner, Markus, Rohrmoser, Michaela, Gruber-Eber, Anita, Windhager, Lukas, Friedel, Caroline C, Dölken, Lars, Eick, Dirk

Journal:

Year:

2013

Language:

english

File:

PDF, 3.19 MB

english, 2013

21

The miRNA-targetome of KSHV and EBV in human B-cells

Malterer, Georg, Dölken, Lars, Haas, Jürgen

Journal:

Year:

2011

Language:

english

File:

PDF, 726 KB

english, 2011

22

Extramedullary hematopoiesis in cytomegalovirus infection: bystander or participant in antiviral immunity?

Jordan, Stefan, Dölken, Lars

Journal:

Future Virology

Year:

2013

Language:

english

File:

PDF, 546 KB

english, 2013

23

Genome-wide survey of interindividual differences of RNA stability in human lymphoblastoid cell lines

Duan, Jubao, Shi, Jianxin, Ge, Xijin, Dölken, Lars, Moy, Winton, He, Deli, Shi, Sandra, Sanders, Alan R., Ross, Jeff, Gejman, Pablo V.

Journal:

Scientific Reports

Year:

2013

Language:

english

File:

PDF, 687 KB

english, 2013

24

The phosphoproteome of toll-like receptor-activated macrophages

Weintz, Gabriele, Olsen, Jesper V, Frühauf, Katja, Niedzielska, Magdalena, Amit, Ido, Jantsch, Jonathan, Mages, Jörg, Frech, Cornelie, Dölken, Lars, Mann, Matthias, Lang, Roland

Journal:

Molecular Systems Biology

Year:

2010

Language:

english

File:

PDF, 778 KB

english, 2010

25

RNA dynamics revealed by metabolic RNA labeling and biochemical nucleoside conversions

Baptista, Marisa A P, Dölken, Lars

Journal:

Year:

2018

Language:

english

File:

PDF, 152 KB

english, 2018

26

Improved Ribo-seq enables identification of cryptic translation events

Erhard, Florian, Halenius, Anne, Zimmermann, Cosima, L'Hernault, Anne, Kowalewski, Daniel J, Weekes, Michael P, Stevanovic, Stefan, Zimmer, Ralf, Dölken, Lars

Journal:

Year:

2018

Language:

english

File:

PDF, 699 KB

english, 2018

27

Dissecting newly transcribed and old RNA using GRAND-SLAM

Jürges, Christopher, Dölken, Lars, Erhard, Florian

Journal:

Year:

2018

Language:

english

File:

PDF, 884 KB

english, 2018

28

Quantitative Detection of t(14;18)-Positive Cells by Real-Time Quantitative PCR Using Fluorogenic Probes

Lars, Dölken, Frank, Schüler, Gottfried, Dölken

Journal:

Year:

1998

Language:

english

File:

PDF, 174 KB

english, 1998

29

scSLAM-seq reveals core features of transcription dynamics in single cells

Erhard, Florian, Baptista, Marisa A. P., Krammer, Tobias, Hennig, Thomas, Lange, Marius, Arampatzi, Panagiota, Jürges, Christopher S., Theis, Fabian J., Saliba, Antoine-Emmanuel, Dölken, Lars

Journal:

Year:

2019

Language:

english

File:

PDF, 9.45 MB

english, 2019

30

scSLAM-seq reveals core features of transcription dynamics in single cells

Erhard, Florian, Baptista, Marisa A. P., Krammer, Tobias, Hennig, Thomas, Lange, Marius, Arampatzi, Panagiota, Jürges, Christopher S., Theis, Fabian J., Saliba, Antoine-Emmanuel, Dölken, Lars

Journal:

Year:

2019

File:

PDF, 9.45 MB

2019

31

Role of Neutral Sphingomyelinase-2 (NSM 2) in the Control of T Cell Plasma Membrane Lipid Composition and Cholesterol Homeostasis

Börtlein, Charlene, Schumacher, Fabian, Kleuser, Burkhard, Dölken, Lars, Avota, Elita

Journal:

Frontiers in Cell and Developmental Biology

Year:

2019

Language:

english

File:

PDF, 2.91 MB

english, 2019

32

Role of Neutral Sphingomyelinase-2 (NSM 2) in the Control of T Cell Plasma Membrane Lipid Composition and Cholesterol Homeostasis

Börtlein, Charlene, Schumacher, Fabian, Kleuser, Burkhard, Dölken, Lars, Avota, Elita

Journal:

Frontiers in Cell and Developmental Biology

Year:

2019

File:

PDF, 2.91 MB

2019